OpendTect  7.0
Public Member Functions | Private Member Functions | List of all members
HDF5::ReaderImpl Class Reference
ODHDF5
Inheritance diagram for HDF5::ReaderImpl:
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Public Member Functions

 ReaderImpl ()
 
 ReaderImpl (const H5::H5File &)
 
virtual ~ReaderImpl ()
 
- Public Member Functions inherited from HDF5::Reader
size_type dimSize (const DataSetKey &, dim_idx_type, uiRetVal &) const
 
uiRetVal get (const DataSetKey &, BufferStringSet &) const
 
template<class T >
uiRetVal get (const DataSetKey &, TypeSet< T > &) const
 
uiRetVal get (IOPar &, const DataSetKey *=nullptr) const
 
uiRetVal getAll (const DataSetKey &, void *) const
 Get the entire data set in current scope. More...
 
uiRetVal getAttributeNames (BufferStringSet &, const DataSetKey *=nullptr) const
 
ArrayNDInfo * getDataSizes (const DataSetKey &, uiRetVal &) const
 
ODDataType getDataType (const DataSetKey &, uiRetVal &) const
 
nr_dims_type getNrDims (const DataSetKey &, uiRetVal &) const
 
uiRetVal getSlab (const DataSetKey &, const SlabSpec &, void *) const
 
uiRetVal getValue (const DataSetKey &, NDPos, void *) const
 Get a single point value. More...
 
uiRetVal getValues (const DataSetKey &, const NDPosBufSet &, void *) const
 Get a set of distinct points' values. More...
 
bool isReader () const override
 
nr_dims_type nrDims () const
 
- Public Member Functions inherited from HDF5::Access
virtual ~Access ()
 
H5::H5File * getHDF5File ()
 
bool hasDataSet (const DataSetKey &) const
 
bool hasGroup (const char *grpnm) const
 
bool isOpen () const
 
uiRetVal open (const char *)
 
uiString sCantSetScope (const DataSetKey &) const
 
- Public Member Functions inherited from HDF5::AccessImpl
 AccessImpl (ReaderImpl &)
 
 AccessImpl (WriterImpl &)
 
virtual ~AccessImpl ()
 

Private Member Functions

void closeFile () override
 
od_int64 curGroupID () const override
 
const char * fileName () const override
 
bool getAttribute (const char *, BufferString &, const DataSetKey *=nullptr) const override
 
bool getAttribute (const char *, double &, const DataSetKey *=nullptr) const override
 
bool getAttribute (const char *, float &, const DataSetKey *=nullptr) const override
 
bool getAttribute (const char *, od_int16 &, const DataSetKey *=nullptr) const override
 
bool getAttribute (const char *, od_int32 &, const DataSetKey *=nullptr) const override
 
bool getAttribute (const char *, od_int64 &, const DataSetKey *=nullptr) const override
 
bool getAttribute (const char *, od_uint16 &, const DataSetKey *=nullptr) const override
 
bool getAttribute (const char *, od_uint32 &, const DataSetKey *=nullptr) const override
 
bool getAttribute (const char *, od_uint64 &, const DataSetKey *=nullptr) const override
 
void getDataSets (const char *grpnm, BufferStringSet &) const override
 Pass a full group name. More...
 
H5::DataSet * getDSScope (const DataSetKey &dsky) const override
 Returns (new) scope. null for root scope. More...
 
void getGroups (BufferStringSet &) const override
 All groups with full names (recursive) More...
 
H5::Group * getGrpScope (const DataSetKey *dsky) const override
 
int getNrAttributes (const DataSetKey *=nullptr) const override
 
H5::H5Object * getScope (const DataSetKey *dsky) const override
 
void gtAll (const H5::DataSet &, void *, uiRetVal &) const override
 
void gtAttribNames (const H5::H5Object &, BufferStringSet &) const override
 
ArrayNDInfo * gtDataSizes (const H5::DataSet &) const override
 
ODDataType gtDataType (const H5::DataSet &) const override
 
void gtInfo (const H5::H5Object &, IOPar &, uiRetVal &) const override
 
nr_dims_type gtNrDims () const override
 
void gtSlab (const H5::DataSet &, const SlabSpec &, void *, uiRetVal &) const override
 
void gtStrings (const H5::DataSet &, BufferStringSet &, uiRetVal &) const override
 
void gtValues (const H5::DataSet &, const NDPosBufSet &, void *, uiRetVal &) const override
 
const H5DataType & h5DataType (const H5::DataSet &) const
 
bool hasAttribute (const char *, const DataSetKey *=nullptr) const override
 
template<class H5Dir >
void listObjs (const H5Dir &, BufferStringSet &, bool wantgroups) const
 
void openFile (const char *, uiRetVal &, bool) override
 
uiRetVal readJSonAttribute (const char *, OD::JSON::ValueSet &, const DataSetKey *=nullptr) const override
 
DataSetKey scope () const override
 
H5::DataSet * setDSScope (const DataSetKey &dsky) override
 
H5::Group * setGrpScope (const DataSetKey *dsky) override
 
H5::H5Object * setScope (const DataSetKey *dsky) override
 

Additional Inherited Members

- Public Types inherited from HDF5::Reader
typedef TypeSet< NDPosBuf > NDPosBufSet
 
- Static Public Member Functions inherited from HDF5::Access
static bool isEnabled (const char *fortype=0)
 
static bool isEnvBlocked (const char *fortype=0)
 
static bool isHDF5File (const char *)
 
static uiString sCannotReadDataSet (const DataSetKey &)
 
static uiString sDataSetNotFound (const DataSetKey &)
 
static const char * sFileExtension ()
 
static uiString sHDF5FileNoLongerAccessibe ()
 
static uiString sHDF5NotAvailable ()
 
static uiString sHDF5NotAvailable (const char *fnm)
 
static uiString sHDF5PackageDispName ()
 
static uiString sNotHDF5File (const char *)
 
static const char * sSettingsEnabKey ()
 
- Static Public Member Functions inherited from HDF5::AccessImpl
static void setErrPrint (bool)
 user switch on/off More...
 
- Public Attributes inherited from HDF5::Access
 mTypeDefArrNDTypes
 
- Protected Types inherited from HDF5::AccessImpl
typedef H5::PredType H5DataType
 
- Protected Member Functions inherited from HDF5::Access
 Access ()
 
- Protected Member Functions inherited from HDF5::AccessImpl
bool atDataSet (const char *) const
 
bool atGroup (const char *&) const
 
void doCloseFile (Access &)
 
const char * gtFileName () const
 
od_int64 gtGroupID () const
 
DataSetKey gtScope () const
 
bool haveDataSet () const
 
bool haveGroup () const
 
H5::DataSet * selectDataSet (const char *) const
 
H5::Group * selectGroup (const char *) const
 
void selectSlab (H5::DataSpace &, const SlabSpec &, TypeSet< hsize_t > *pcounts=0) const
 can throw, use in try block More...
 
H5::DataSet * stDSScope (const DataSetKey &)
 
H5::DataSet * stDSScope (const DataSetKey &) const
 
H5::Group * stGrpScope (const DataSetKey *)
 
H5::Group * stGrpScope (const DataSetKey *) const
 
H5::H5Object * stScope (const DataSetKey *)
 
H5::H5Object * stScope (const DataSetKey *) const
 
- Static Protected Member Functions inherited from HDF5::Reader
static uiString sBadDataSpace ()
 
- Static Protected Member Functions inherited from HDF5::Access
static uiString sFileNotOpen ()
 
static uiString sHDF5Err (const uiString &)
 
static const char * sNeedScope ()
 
static const char * sNoDataPassed ()
 
static const char * sOpenFileFirst ()
 
- Static Protected Member Functions inherited from HDF5::AccessImpl
static const H5DataType & h5DataTypeFor (ODDataType)
 
static bool haveErrPrint ()
 
- Protected Attributes inherited from HDF5::Access
H5::H5File * file_
 
bool myfile_
 
- Protected Attributes inherited from HDF5::AccessImpl
Access & acc_
 
H5::DataSet dataset_
 
H5::Group group_
 
ArrayNDInfo::nr_dims_type nrdims_
 

Detailed Description

<>

Constructor & Destructor Documentation

◆ ReaderImpl() [1/2]

HDF5::ReaderImpl::ReaderImpl ( )

◆ ReaderImpl() [2/2]

HDF5::ReaderImpl::ReaderImpl ( const H5::H5File &  )

◆ ~ReaderImpl()

virtual HDF5::ReaderImpl::~ReaderImpl ( )
virtual

Member Function Documentation

◆ closeFile()

void HDF5::ReaderImpl::closeFile ( )
inlineoverrideprivatevirtual

Implements HDF5::Access.

◆ curGroupID()

od_int64 HDF5::ReaderImpl::curGroupID ( ) const
inlineoverrideprivatevirtual

Implements HDF5::Access.

◆ fileName()

const char* HDF5::ReaderImpl::fileName ( ) const
inlineoverrideprivatevirtual

Implements HDF5::Access.

◆ getAttribute() [1/9]

bool HDF5::ReaderImpl::getAttribute ( const char *  ,
BufferString &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getAttribute() [2/9]

bool HDF5::ReaderImpl::getAttribute ( const char *  ,
double &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getAttribute() [3/9]

bool HDF5::ReaderImpl::getAttribute ( const char *  ,
float &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getAttribute() [4/9]

bool HDF5::ReaderImpl::getAttribute ( const char *  ,
od_int16 &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getAttribute() [5/9]

bool HDF5::ReaderImpl::getAttribute ( const char *  ,
od_int32 &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getAttribute() [6/9]

bool HDF5::ReaderImpl::getAttribute ( const char *  ,
od_int64 &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getAttribute() [7/9]

bool HDF5::ReaderImpl::getAttribute ( const char *  ,
od_uint16 &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getAttribute() [8/9]

bool HDF5::ReaderImpl::getAttribute ( const char *  ,
od_uint32 &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getAttribute() [9/9]

bool HDF5::ReaderImpl::getAttribute ( const char *  ,
od_uint64 &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getDataSets()

void HDF5::ReaderImpl::getDataSets ( const char *  fullgrpnm,
BufferStringSet &   
) const
overrideprivatevirtual

Pass a full group name.

Implements HDF5::Reader.

◆ getDSScope()

H5::DataSet* HDF5::ReaderImpl::getDSScope ( const DataSetKey &  ) const
inlineoverrideprivatevirtual

Returns (new) scope. null for root scope.

Implements HDF5::Access.

◆ getGroups()

void HDF5::ReaderImpl::getGroups ( BufferStringSet &  ) const
overrideprivatevirtual

All groups with full names (recursive)

Implements HDF5::Reader.

◆ getGrpScope()

H5::Group* HDF5::ReaderImpl::getGrpScope ( const DataSetKey *  dsky) const
inlineoverrideprivatevirtual

Implements HDF5::Access.

◆ getNrAttributes()

int HDF5::ReaderImpl::getNrAttributes ( const DataSetKey *  = nullptr) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ getScope()

H5::H5Object* HDF5::ReaderImpl::getScope ( const DataSetKey *  dsky) const
inlineoverrideprivatevirtual

Implements HDF5::Access.

◆ gtAll()

void HDF5::ReaderImpl::gtAll ( const H5::DataSet &  ,
void *  ,
uiRetVal &   
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ gtAttribNames()

void HDF5::ReaderImpl::gtAttribNames ( const H5::H5Object &  ,
BufferStringSet &   
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ gtDataSizes()

ArrayNDInfo* HDF5::ReaderImpl::gtDataSizes ( const H5::DataSet &  ) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ gtDataType()

ODDataType HDF5::ReaderImpl::gtDataType ( const H5::DataSet &  ) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ gtInfo()

void HDF5::ReaderImpl::gtInfo ( const H5::H5Object &  ,
IOPar &  ,
uiRetVal &   
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ gtNrDims()

nr_dims_type HDF5::ReaderImpl::gtNrDims ( ) const
inlineoverrideprivatevirtual

Implements HDF5::Reader.

◆ gtSlab()

void HDF5::ReaderImpl::gtSlab ( const H5::DataSet &  ,
const SlabSpec &  ,
void *  ,
uiRetVal &   
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ gtStrings()

void HDF5::ReaderImpl::gtStrings ( const H5::DataSet &  ,
BufferStringSet &  ,
uiRetVal &   
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ gtValues()

void HDF5::ReaderImpl::gtValues ( const H5::DataSet &  ,
const NDPosBufSet &  ,
void *  ,
uiRetVal &   
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ h5DataType()

const H5DataType& HDF5::ReaderImpl::h5DataType ( const H5::DataSet &  ) const
private

◆ hasAttribute()

bool HDF5::ReaderImpl::hasAttribute ( const char *  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ listObjs()

template<class H5Dir >
void HDF5::ReaderImpl::listObjs ( const H5Dir &  ,
BufferStringSet &  ,
bool  wantgroups 
) const
private

◆ openFile()

void HDF5::ReaderImpl::openFile ( const char *  ,
uiRetVal &  ,
bool   
)
overrideprivatevirtual

Implements HDF5::Access.

◆ readJSonAttribute()

uiRetVal HDF5::ReaderImpl::readJSonAttribute ( const char *  ,
OD::JSON::ValueSet &  ,
const DataSetKey *  = nullptr 
) const
overrideprivatevirtual

Implements HDF5::Reader.

◆ scope()

DataSetKey HDF5::ReaderImpl::scope ( ) const
inlineoverrideprivatevirtual

Implements HDF5::Access.

◆ setDSScope()

H5::DataSet* HDF5::ReaderImpl::setDSScope ( const DataSetKey &  dsky)
inlineoverrideprivatevirtual

Implements HDF5::Access.

◆ setGrpScope()

H5::Group* HDF5::ReaderImpl::setGrpScope ( const DataSetKey *  dsky)
inlineoverrideprivatevirtual

Implements HDF5::Access.

◆ setScope()

H5::H5Object* HDF5::ReaderImpl::setScope ( const DataSetKey *  dsky)
inlineoverrideprivatevirtual

Implements HDF5::Access.

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